The parking lots in Auto Club Speedway were rough but it's been closed down so the nearest events are held at Angel Stadium in Anaheim. I haven't been but I expect the surface to be smoother there.
KYB technical support responded to my email and reiterated below what you mentioned.
"The jounce bumper compresses during the cycle of the damper the 1/2" difference will not negatively impact the performance of the strut."
I went ahead and installed the KYB bump stops on the rear Bilstein B4 struts. Decided to reuse the stock plastic tube covers and I was able to fit them on the bump stops. The boots that come with the KYB kit don't sit securely. Going to install the set this Friday if I get the chance.
i found that all of the KYB stuff I ordered for my FiST to redo the suspension was all incorrect. even the mounts didn't function properly - i was chasing a peculiar suspension noise for a period of time which was due to the
absolutely cooked KYB mounts. it's better to go all OEM. only good part I used from KYB were the bearings. head to the dealer, get all new OEM bump stops, dust boots, mounts, etc.
edit: saw that you can't source just the rear bump stops without ordering motorcraft dampers - just reuse the old bump stops if they're not cracked/broken. 160k miles in california/arizona heat since 2017 & both my front and rear bump stops were in great enough condition to reuse.